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  5. Cba_g17085

Cba_g17085


Description : not classified & original description: none


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17085

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00109510 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
AT5G08650 No alias Small GTP-binding protein 0.03 OrthoFinder output from all 47 species
Als_g09651 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g02197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G059400.1 Ceric.02G059400 not classified & original description: pacid=50584081... 0.05 OrthoFinder output from all 47 species
Cre03.g165000 No alias Translation factor GUF1 homolog, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g07140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022409001 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
LOC_Os02g06300.1 LOC_Os02g06300 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Lfl_g03115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo163486 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc04g015450.3.1 Solyc04g015450 Translation factor GUF1 homolog, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g04229 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e025200_P002 Zm00001e025200 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004359 glutaminase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013842 LepA_CTD 601 707
IPR004161 EFTu-like_2 318 388
IPR000640 EFG_V-like 512 598
IPR000795 T_Tr_GTP-bd_dom 116 294
No external refs found!