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  5. Cba_g16513

Cba_g16513


Description : not classified & original description: none


Gene families : OG0005000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16513
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT2G32640 No alias Lycopene beta/epsilon cyclase protein 0.05 OrthoFinder output from all 47 species
Adi_g015811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G032900.1 Ceric.08G032900 not classified & original description: pacid=50638882... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021441.9 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre06.g264250 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02842 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03750 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01030484001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_08260 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g32630.1 LOC_Os08g32630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g01577 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp4g18450.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g08869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g102950.3.1 Solyc01g102950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g51272 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g27372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022396_P002 Zm00001e022396 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!