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  5. Cba_g14652

Cba_g14652


Description : not classified & original description: none


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14652

Target Alias Description ECC score Gene Family Method Actions
AT1G22530 PATL2 PATELLIN 2 0.03 OrthoFinder output from all 47 species
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.02 OrthoFinder output from all 47 species
AT3G51670 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.02 OrthoFinder output from all 47 species
Adi_g081349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G036600.1 Ceric.39G036600 not classified & original description: pacid=50583070... 0.01 OrthoFinder output from all 47 species
GSVIVT01026078001 No alias Patellin-3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g06280.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g01183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007915 No alias not classified & original description: CDS=438-2087 0.03 OrthoFinder output from all 47 species
Tin_g10538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e031502_P004 Zm00001e031502 Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e031729_P005 Zm00001e031729 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e037771_P002 Zm00001e037771 Patellin-4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 314 457
IPR011074 CRAL/TRIO_N_dom 260 288
No external refs found!