Cba_g13515

Description : not classified & original description: none

Gene families : OG0001057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001057_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g13515

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00209300	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
Aev_g20185	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g17815	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g07359	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.37G026400.1	Ceric.37G026400	not classified & original description: pacid=50615533...	0.03	OrthoFinder output from all 47 species
Dcu_g21349	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g51554	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g25085	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g07998	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g08833	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g23618	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g44218	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g31518	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g116880.3.1	Solyc03g116880	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc12g010050.2.1	Solyc12g010050	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Tin_g07631	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003412_P001	Zm00001e003412	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e019556_P001	Zm00001e019556	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e028917_P002	Zm00001e028917	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e030438_P002	Zm00001e030438	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e041165_P001	Zm00001e041165	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
CC	GO:0070652	HAUS complex	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	295	470

External Links

No external refs found!

Cba_g13515

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation