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  5. Cba_g13445

Cba_g13445 (GFA2)


Aliases : GFA2

Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13445

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00246350 GFA2,... Chaperone protein dnaJ GFA2, mitochondrial... 0.02 OrthoFinder output from all 47 species
Adi_g047802 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19401 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031657 GFA2 co-chaperone *(Hsp40) & original description: CDS=1-1614 0.03 OrthoFinder output from all 47 species
Dde_g11087 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14751 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17622 GFA2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g02620.1 GFA2, LOC_Os06g02620 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Len_g04730 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433752g0010 GFA2 Chaperone protein dnaJ GFA2, mitochondrial... 0.02 OrthoFinder output from all 47 species
Ore_g17506 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20511 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08571 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63023 GFA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06878 GFA2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020446 GFA2 co-chaperone *(Hsp40) & original description: CDS=170-1507 0.02 OrthoFinder output from all 47 species
Spa_g04488 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15157 GFA2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002939 DnaJ_C 210 423
IPR001623 DnaJ_domain 90 152
IPR001305 HSP_DnaJ_Cys-rich_dom 236 297
No external refs found!