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  5. Cba_g13170

Cba_g13170 (DND1, ATCNGC2, CNGC2)


Aliases : DND1, ATCNGC2, CNGC2

Description : temperature sensor protein *(CNGC2) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13170
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00063110 DND1, ATCNGC2,... Solute transport.channels.VIC superfamily.cyclic... 0.04 OrthoFinder output from all 47 species
AMTR_s00210p00019190 CNGC5, ATCNGC5,... Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.02 OrthoFinder output from all 47 species
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.02 OrthoFinder output from all 47 species
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.01 OrthoFinder output from all 47 species
AT2G46450 ATCNGC12, CNGC12 cyclic nucleotide-gated channel 12 0.03 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.03 OrthoFinder output from all 47 species
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.02 OrthoFinder output from all 47 species
AT5G57940 CNGC5, ATCNGC5 cyclic nucleotide gated channel 5 0.02 OrthoFinder output from all 47 species
Adi_g060124 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ala_g05813 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ala_g24639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33029 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Als_g12676 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Als_g34084 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15680.t1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17957.t1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g030979 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.06 OrthoFinder output from all 47 species
Azfi_s0301.g063721 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Cba_g15401 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Ceric.29G077700.1 CNGC7, ATCNGC7,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Dac_g37580 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19188 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01007785001 CNGC18, ATCNGC18 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g57370.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41710.1 CNGC15,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
LOC_Os05g42250.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os12g28260.1 CNGC7, ATCNGC7,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Len_g23962 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Lfl_g30559 DND2, CNGC4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g04110.1 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Mp6g01920.1 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel (CNGC) 0.01 OrthoFinder output from all 47 species
Pir_g44975 ATCNGC3, CNGC3, CNGC3.C not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025297 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Sam_g30209 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Smo113786 ATCNGC9, CNGC9 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Solyc02g088560.4.1 DND1, ATCNGC2,... cyclic nucleotide-gated cation channel (CNGC).... 0.04 OrthoFinder output from all 47 species
Solyc07g005590.3.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc08g069140.4.1 ATCNGC14,... cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Spa_g00978 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Zm00001e012009_P001 DND1, ATCNGC2,... cyclic nucleotide-gated cation channel (CNGC).... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 108 430
No external refs found!