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  5. Cba_g12958

Cba_g12958 (ATCYP20-2, CYP20-2)


Aliases : ATCYP20-2, CYP20-2

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12958
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00225920 ATCYP20-2,... Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00158000 ROC4,... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
AT3G62030 ROC4 rotamase CYP 4 0.03 OrthoFinder output from all 47 species
AT5G13120 ATCYP20-2, CYP20-2 cyclophilin 20-2 0.04 OrthoFinder output from all 47 species
Dde_g02019 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02039 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005017 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=32-877 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016829 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=122-877 0.03 OrthoFinder output from all 47 species
Sam_g15124 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo229229 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Solyc01g009990.3.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.04 OrthoFinder output from all 47 species
Zm00001e025457_P001 ROC4, Zm00001e025457 protein folding catalyst 0.04 OrthoFinder output from all 47 species
Zm00001e027678_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 100 256
No external refs found!