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  5. Cba_g12257

Cba_g12257 (POL)


Aliases : POL

Description : clade C phosphatase & original description: none


Gene families : OG0001318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12257
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00193410 PLL4,... Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
AT1G07630 PLL5 pol-like 5 0.05 OrthoFinder output from all 47 species
AT2G28890 PLL4 poltergeist like 4 0.02 OrthoFinder output from all 47 species
Adi_g106188 PLL5 clade C phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02519 POL clade C phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12910 POL clade C phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G009800.1 POL, Ceric.29G009800 clade C phosphatase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.32G073000.1 POL, Ceric.32G073000 clade C phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G069400.1 PLL5, Ceric.37G069400 clade C phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11341 POL clade C phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05370 POL clade C phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034176001 PLL5 Protein modification.dephosphorylation.serine/threonine... 0.05 OrthoFinder output from all 47 species
LOC_Os03g60650.1 PLL4, LOC_Os03g60650 clade C phosphatase 0.04 OrthoFinder output from all 47 species
Mp1g01520.1 POL clade C phosphatase 0.03 OrthoFinder output from all 47 species
Msp_g13922 POL clade C phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016497 POL clade C phosphatase & original description: CDS=1-2550 0.02 OrthoFinder output from all 47 species
Solyc06g076100.3.1 PLL5, Solyc06g076100 clade C phosphatase 0.03 OrthoFinder output from all 47 species
Tin_g01253 POL clade C phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006191_P001 PLL4, Zm00001e006191 clade C phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 631 675
IPR001932 PPM-type_phosphatase-like_dom 730 853
No external refs found!