Aliases : PUM1, APUM1
Description : not classified & original description: none
Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g07329 | APUM2, PUM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g28239 | PUM1, APUM1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g10215 | APUM4, PUM4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_42218g0010 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008199 | ferric iron binding | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012940 | NABP | 359 | 747 |
IPR001313 | Pumilio_RNA-bd_rpt | 1015 | 1044 |
IPR001313 | Pumilio_RNA-bd_rpt | 969 | 1002 |
IPR001313 | Pumilio_RNA-bd_rpt | 824 | 857 |
IPR001313 | Pumilio_RNA-bd_rpt | 752 | 786 |
IPR001313 | Pumilio_RNA-bd_rpt | 896 | 931 |
IPR001313 | Pumilio_RNA-bd_rpt | 934 | 964 |
IPR001313 | Pumilio_RNA-bd_rpt | 866 | 891 |
IPR001313 | Pumilio_RNA-bd_rpt | 788 | 821 |
No external refs found! |