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  5. Cba_g11865

Cba_g11865


Description : not classified & original description: none


Gene families : OG0002305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11865

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00210260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00032070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G15240 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.06 OrthoFinder output from all 47 species
AT2G15900 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.03 OrthoFinder output from all 47 species
Aev_g15044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031845001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g50660.1 LOC_Os05g50660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g04995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024629_P003 Zm00001e024629 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003114 Phox_assoc 108 285
IPR013937 Sorting_nexin_C 906 1044
IPR001683 PX_dom 628 706
No external refs found!