Cba_g11026 (RPL12-A, RPL12)

Aliases : RPL12-A, RPL12

Description : component *(bL12c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0004015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004015_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g11026

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00109340	RPL12-A, RPL12,...	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
AT3G27830	RPL12-A, RPL12	ribosomal protein L12-A	0.04	OrthoFinder output from all 47 species
AT3G27850	RPL12-C	ribosomal protein L12-C	0.04	OrthoFinder output from all 47 species
Aev_g46439	RPL12-C	component *(bL12c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.23G047100.1	RPL12-A, RPL12,...	component *(bL12c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cre13.g581650	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dac_g04548	RPL12-A, RPL12	component *(bL12c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Dde_g20806	RPL12-A, RPL12	component *(bL12c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01032454001	RPL12-A, RPL12	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
LOC_Os01g47330.1	RPL12-C, LOC_Os01g47330	component psRPL12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
LOC_Os05g49320.1	RPL12-C, LOC_Os05g49320	component psRPL12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Mp5g15720.1	RPL12-C	component psRPL12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Msp_g10664	RPL12-C	component *(bL12c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Nbi_g08072	RPL12-A, RPL12	component *(bL12c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ore_g01687	RPL12-C	component *(bL12c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ppi_g33033	RPL12-A, RPL12	component *(bL12c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Solyc02g086730.3.1	RPL12-C, Solyc02g086730	component psRPL12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Spa_g56005	RPL12-C	component *(bL12c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Zm00001e028001_P001	RPL12-C, Zm00001e028001	component psRPL12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008932	Ribosomal_L7/L12_oligo	67	116
IPR013823	Ribosomal_L7/L12_C	126	193

External Links

No external refs found!

Cba_g11026 (RPL12-A, RPL12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation