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  5. Cba_g08756

Cba_g08756 (RPE, EMB2728)


Aliases : RPE, EMB2728

Description : EC_5.1 racemase or epimerase & original description: none


Gene families : OG0004751 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08756
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00063510 RPE, EMB2728,... Photosynthesis.calvin cycle.phosphopentose epimerase 0.09 OrthoFinder output from all 47 species
AT5G61410 RPE, EMB2728 D-ribulose-5-phosphate-3-epimerase 0.04 OrthoFinder output from all 47 species
Adi_g020221 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14485 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g01466 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08095 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27840 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32397 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07259 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene18480.t1 RPE, EMB2728,... EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G052500.1 RPE, EMB2728,... EC_5.1 racemase or epimerase & original description:... 0.1 OrthoFinder output from all 47 species
Ceric.30G051300.1 RPE, EMB2728,... EC_5.1 racemase or epimerase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020564.39 RPE, EMB2728 Ribulose-phosphate 3-epimerase, chloroplastic... 0.06 OrthoFinder output from all 47 species
Cre12.g511900 RPE, EMB2728 Photosynthesis.calvin cycle.phosphopentose epimerase 0.03 OrthoFinder output from all 47 species
Dac_g15437 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g42634 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g14724 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06530 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01007976001 RPE, EMB2728 Photosynthesis.calvin cycle.phosphopentose epimerase 0.13 OrthoFinder output from all 47 species
Gb_19425 RPE, EMB2728 phosphopentose epimerase 0.09 OrthoFinder output from all 47 species
LOC_Os03g07300.1 RPE, EMB2728,... phosphopentose epimerase 0.12 OrthoFinder output from all 47 species
Len_g19382 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.16 OrthoFinder output from all 47 species
Len_g59136 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06506 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g11661 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.08 OrthoFinder output from all 47 species
MA_92814g0010 RPE, EMB2728 phosphopentose epimerase 0.1 OrthoFinder output from all 47 species
Mp6g10960.1 RPE, EMB2728 phosphopentose epimerase 0.11 OrthoFinder output from all 47 species
Msp_g05510 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.13 OrthoFinder output from all 47 species
Nbi_g19497 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g06182 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.12 OrthoFinder output from all 47 species
Pnu_g08509 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g61783 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g27386 No alias EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Smo228435 RPE, EMB2728 Photosynthesis.calvin cycle.phosphopentose epimerase 0.11 OrthoFinder output from all 47 species
Solyc03g115820.3.1 RPE, EMB2728,... phosphopentose epimerase 0.08 OrthoFinder output from all 47 species
Spa_g28901 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.14 OrthoFinder output from all 47 species
Spa_g40504 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g16249 RPE, EMB2728 EC_5.1 racemase or epimerase & original description: none 0.12 OrthoFinder output from all 47 species
Zm00001e000521_P003 RPE, EMB2728,... phosphopentose epimerase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000056 Ribul_P_3_epim-like 65 263
No external refs found!