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  5. Cba_g08443

Cba_g08443 (WIN1, SHN1)


Aliases : WIN1, SHN1

Description : cutin and suberin biosynthesis transcription factor *(SHN) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08443

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00064760 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g00443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03105 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.05 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Als_g11527 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g45961 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Als_g49275 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26610 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aop_g10291 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g38332 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07735.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63782.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene67758.t1 TINY2, Aspi01Gene67758 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.28G005200.1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Dac_g36841 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00325 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g25390 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01016684001 RAP2.12 Ethylene-responsive transcription factor RAP2-12... 0.03 OrthoFinder output from all 47 species
GSVIVT01021098001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01022109001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_26739 DREB26 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_29263 DREB26 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os01g21120.1 HRE2, LOC_Os01g21120 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g46870.1 CRF1, LOC_Os01g46870 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64790.1 ERF110, LOC_Os01g64790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08460.1 RAP2.12, LOC_Os03g08460 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
LOC_Os03g15660.1 DREB26, LOC_Os03g15660 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g11460.1 HRE1, LOC_Os09g11460 Ethylene-responsive transcription factor ERF073... 0.03 OrthoFinder output from all 47 species
Len_g13558 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Len_g49762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25640 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g18650.1 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Nbi_g21523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17161 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g20838 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ore_g28319 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g37778 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25028 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37613 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g46475 RRTF1 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32187 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c10_7030V3.1 Pp3c10_7030 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Solyc03g093610.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g035700.1.1 Solyc06g035700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc09g066360.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc12g049560.2.1 RAP2.2, Solyc12g049560 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g08163 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g41579 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g42439 RAP2.9, DEAR5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54949 TINY2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002151_P001 HRD, Zm00001e002151 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023157_P001 Zm00001e023157 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e028920_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e035334_P001 RAP2.11, Zm00001e035334 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 54
No external refs found!