1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g07958

Cba_g07958 (NPQ1, AVDE1)


Aliases : NPQ1, AVDE1

Description : violaxanthin de-epoxidase *(VDE) & original description: none


Gene families : OG0006528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006528_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07958
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00058770 NPQ1, AVDE1,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Ala_g01777 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01565 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33475.t1 NPQ1, AVDE1,... violaxanthin de-epoxidase *(VDE) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z326600.1 NPQ1, AVDE1,... violaxanthin de-epoxidase *(VDE) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11651 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15659 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026405001 NPQ1, AVDE1 Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
Gb_27593 NPQ1, AVDE1 violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.06 OrthoFinder output from all 47 species
LOC_Os04g31040.1 NPQ1, AVDE1,... violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from all 47 species
MA_10426812g0010 NPQ1, AVDE1 violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from all 47 species
Mp7g15960.1 NPQ1, AVDE1 violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from all 47 species
Msp_g12644 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29646 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34640 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11779 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019899 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g39279 No alias violaxanthin de-epoxidase *(VDE) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49677 No alias violaxanthin de-epoxidase *(VDE) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g050930.3.1 NPQ1, AVDE1,... violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.04 OrthoFinder output from all 47 species
Spa_g43709 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e008403_P001 NPQ1, AVDE1,... violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046422 violaxanthin de-epoxidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR010788 VDE_dom 110 350
No external refs found!