Cba_g07650 (IMPA-1, IMPA1,...)

Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: none

Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g07650

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00147p00043750	IMPA-1, IMPA1,...	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
AT1G02690	IMPA-6	importin alpha isoform 6	0.02	OrthoFinder output from all 47 species
Adi_g015994	IMPA-2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g025667	IMPA-4	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Als_g04989	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Azfi_s0068.g036443	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.04	OrthoFinder output from all 47 species
Ceric.16G061800.1	IMPA-4, Ceric.16G061800	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Ehy_g05973	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
LOC_Os01g14950.1	IMPA-1, IMPA1,...	importin alpha adaptor proteins	0.03	OrthoFinder output from all 47 species
LOC_Os07g48880.3	IMPA-1, IMPA1,...	importin alpha adaptor proteins	0.03	OrthoFinder output from all 47 species
Lfl_g18525	IMPA-2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_92132g0010	IMPA-1, IMPA1,...	importin alpha adaptor proteins	0.02	OrthoFinder output from all 47 species
Nbi_g02066	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.04	OrthoFinder output from all 47 species
Spa_g41578	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.04	OrthoFinder output from all 47 species
Tin_g04020	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Zm00001e017243_P001	IMPA-1, IMPA1,...	importin alpha adaptor proteins	0.03	OrthoFinder output from all 47 species
Zm00001e025581_P001	IMPA-1, IMPA1,...	importin alpha adaptor proteins	0.03	OrthoFinder output from all 47 species
Zm00001e031157_P001	IMPA-1, IMPA1,...	importin alpha adaptor proteins	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	Interproscan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	359	398
IPR000225	Armadillo	244	271
IPR000225	Armadillo	276	313
IPR000225	Armadillo	403	441
IPR000225	Armadillo	149	187
IPR000225	Armadillo	316	357
IPR000225	Armadillo	106	146
IPR000225	Armadillo	190	231
IPR002652	Importin-a_IBB	12	94
IPR032413	Arm_3	457	502

External Links

No external refs found!

Cba_g07650 (IMPA-1, IMPA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation