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  5. Cba_g07626

Cba_g07626 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : transcriptional regulator *(HsfA1) & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07626

Target Alias Description ECC score Gene Family Method Actions
Ala_g13109 ATHSF1, HSF1,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27045 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55061.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69372.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20790 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g13545 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20880 AT-HSFA6B, HSFA6B not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022134001 HSF4, HSFB1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.05 OrthoFinder output from all 47 species
GSVIVT01035385001 HSFA2, ATHSFA2 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Nbi_g21014 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32244 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12831 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g35931 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006000.3.1 HSF A4A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Spa_g09077 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09546 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45152 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020490_P001 AT-HSFA6B,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 54 143
No external refs found!