Cba_g06430 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)

Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : HSF-type transcription factor & original description: none

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g06430
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00068180	AT-HSFB2A,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.04	OrthoFinder output from all 47 species
Ala_g12580	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g18442	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g24142	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05891	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g21536	HSFA1E, ATHSFA1E	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g19456	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65605.t1	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g15368	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10301	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g31318	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01020781001	HSFA4C, RHA1, AT-HSFA4C	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
LOC_Os03g12370.1	HSFA1B, ATHSF3,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g45410.1	HSF A4A,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g28354.1	HSF4, HSFB1,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
MA_11527g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
MpVg00470.1	HSFA1B, ATHSF3,...	No annotation	0.03	OrthoFinder output from all 47 species
Pir_g11269	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05097	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g48572	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59254	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015790	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g14010	No alias	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g055710.3.1	HSFA4C, RHA1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Solyc09g059520.3.1	HSFA8, AT-HSFA8,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Spa_g55040	HSF4, HSFB1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	26	115

External Links

No external refs found!

Cba_g06430 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation