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  5. Cba_g05874

Cba_g05874 (ATSLY1)


Aliases : ATSLY1

Description : not classified & original description: none


Gene families : OG0004244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004244_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05874
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0021.g015708 ATSLY1 not classified & original description: CDS=1-2082 0.03 OrthoFinder output from all 47 species
Lfl_g01777 ATSLY1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12960 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07440 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02049 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002799_P001 ATSLY1, Zm00001e002799 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e023511_P002 ATSLY1, Zm00001e023511 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 35 596
No external refs found!