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  5. Cba_g05839

Cba_g05839


Description : not classified & original description: none


Gene families : OG0002200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05839

Target Alias Description ECC score Gene Family Method Actions
AT4G25620 No alias hydroxyproline-rich glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Als_g16232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01883 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.24G040300.1 Ceric.24G040300 not classified & original description: pacid=50628718... 0.02 OrthoFinder output from all 47 species
GSVIVT01019732001 No alias Uncharacterized protein At1g76660 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os01g01390.3 LOC_Os01g01390 Uncharacterized protein At1g76660 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g01919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429574g0010 No alias Uncharacterized protein At1g76660 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_7327g0010 No alias Uncharacterized protein At1g76660 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp1g10040.1 No alias Uncharacterized protein At1g76660 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g04536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016165 No alias not classified & original description: CDS=159-1382 0.02 OrthoFinder output from all 47 species
Sam_g30385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g081240.3.1 Solyc08g081240 Uncharacterized protein At1g76660 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g03332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!