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  5. Cba_g05332

Cba_g05332


Description : actin stability co-factor *(PMIR) & original description: none


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05332

Target Alias Description ECC score Gene Family Method Actions
AT1G42550 PMI1 plastid movement impaired1 0.02 OrthoFinder output from all 47 species
Aob_g10994 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G005400.1 Ceric.16G005400 actin stability co-factor *(PMIR) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g38090.1 PMI1, LOC_Os09g38090 actin stability factor (PMI1/PMI15) 0.02 OrthoFinder output from all 47 species
LOC_Os10g39430.1 PMI1, LOC_Os10g39430 actin stability factor (PMI1/PMI15) 0.02 OrthoFinder output from all 47 species
Len_g26104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_6196222g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g10024 No alias actin stability co-factor *(PMIR) & original description: none 0.01 OrthoFinder output from all 47 species
Smo111808 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.02 OrthoFinder output from all 47 species
Zm00001e034908_P002 PMI1, Zm00001e034908 actin stability factor (PMI1/PMI15) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 1131 1175
IPR019448 NT-C2 155 297
No external refs found!