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  5. Cba_g04639

Cba_g04639 (AtERF48, DREB2C)


Aliases : AtERF48, DREB2C

Description : subgroup ERF-IV/DREB2 transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04639
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT1G22985 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G25470 FTQ4, CBF2,... C-repeat/DRE binding factor 2 0.04 OrthoFinder output from all 47 species
AT4G25490 DREB1B, ATCBF1, CBF1 C-repeat/DRE binding factor 1 0.04 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g008628 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Adi_g016417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018599 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Adi_g022277 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g031493 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g073952 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g111958 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g02425 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g03220 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06485 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g07817 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01005 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g33703 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07015 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70907.t1 Aspi01Gene70907 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0045.g029841 No alias not classified & original description: CDS=1-2064 0.02 OrthoFinder output from all 47 species
Ceric.02G053500.1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre08.g364400 RAP2.2 No description available 0.03 OrthoFinder output from all 47 species
Dcu_g02635 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g02774 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Dde_g26909 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01023 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05355 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07535 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g11203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11454 ERF-1, ATERF-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11833 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27325 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ehy_g30923 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013914001 ERF-6-6, ERF6, ATERF6 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_20395 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g54890.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os01g64790.1 ERF110, LOC_Os01g64790 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08460.1 RAP2.12, LOC_Os03g08460 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
LOC_Os04g46240.1 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46250.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31580.1 RAP2.4, LOC_Os08g31580 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g13940.2 LOC_Os09g13940 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41330.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Len_g11014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34955 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g47156 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g55869 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26716 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_103035g0010 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_121581g0010 No alias Ethylene-responsive transcription factor RAP2-13... 0.05 OrthoFinder output from all 47 species
MA_198113g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_3405g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_502153g0010 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_84578g0010 HRE1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Msp_g18978 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30591 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g43138 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09486 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g09626 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12944 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ore_g36192 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44015 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g44895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42920 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33101 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g090560.4.1 Solyc01g090560 transcription factor (DREB) 0.07 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g052410.3.1 DREB2A, DREB2,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc06g063070.3.1 RAP2.12, Solyc06g063070 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g066660.1.1 TINY2, Solyc08g066660 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e000609_P001 RAP2.2, Zm00001e000609 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e007447_P001 Zm00001e007447 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e014008_P002 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e016064_P001 RAP2.2, Zm00001e016064 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e023686_P001 Zm00001e023686 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e023870_P001 RAP2.4, Zm00001e023870 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e029765_P001 Zm00001e029765 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e031438_P002 HRE2, Zm00001e031438 Ethylene-responsive transcription factor RAP2-3... 0.03 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e041539_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 71 119
No external refs found!