Cba_g03087


Description : not classified & original description: none


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03087

Target Alias Description ECC score Gene Family Method Actions
AT5G56120 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63638.t1 Aspi01Gene63638 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0016.g014319 No alias not classified & original description: CDS=1-1230 0.03 OrthoFinder output from all 47 species
Ceric.34G051200.1 Ceric.34G051200 not classified & original description: pacid=50623802... 0.02 OrthoFinder output from all 47 species
Dac_g20467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g38790.1 LOC_Os08g38790 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003347 No alias not classified & original description: CDS=1-1002 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003353 No alias not classified & original description: CDS=1-708 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003378 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026035 No alias not classified & original description: CDS=1-822 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s3244.g028679 No alias not classified & original description: CDS=1-510 0.03 OrthoFinder output from all 47 species
Sam_g13099 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g17313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g066040.1.1 Solyc07g066040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e003437_P001 Zm00001e003437 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011930_P001 Zm00001e011930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!