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  5. Cba_g02605

Cba_g02605


Description : not classified & original description: none


Gene families : OG0002017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02605

Target Alias Description ECC score Gene Family Method Actions
Ala_g26209 emb1075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g47110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22205.t1 emb1075, Aspi01Gene22205 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22207.t1 emb1075, Aspi01Gene22207 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0422.g069190 emb1075 not classified & original description: CDS=1-1872 0.03 OrthoFinder output from all 47 species
Ceric.19G003700.1 emb1075, Ceric.19G003700 not classified & original description: pacid=50576067... 0.02 OrthoFinder output from all 47 species
Ceric.19G035700.1 emb1075, Ceric.19G035700 not classified & original description: pacid=50575667... 0.03 OrthoFinder output from all 47 species
Ceric.38G050700.1 emb1075, Ceric.38G050700 not classified & original description: pacid=50579940... 0.02 OrthoFinder output from all 47 species
Dac_g18865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29045 emb1075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35565 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g41857 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g44525 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g15345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19174 emb1075 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48346 GAD2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g02701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60370 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000639 No alias not classified & original description: CDS=38-1963 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000654 No alias not classified & original description: CDS=619-2565 0.04 OrthoFinder output from all 47 species
Sam_g05069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g22963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo270727 emb1075 Histidine decarboxylase OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Spa_g09746 GAD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09747 GAD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 297 447
No external refs found!