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Aliases : RTNLB2, BTI2
Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none
Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g00537 | |
| Cluster | HCCA: Cluster_223 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00092p00151450 | evm_27.TU.AmTr_v1... | Reticulon-like protein B8 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113947 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g25844 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g01159 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene24599.t1 | RTNLB2, BTI2,... | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026028 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G059800.1 | BTI1, RTNLB1,... | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03409 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019440001 | No alias | Reticulon-like protein B4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10741 | No alias | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g24770.1 | BTI1, RTNLB1,... | ER-associated protein (Reticulon) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26287 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g19664 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g22278 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g27211 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Mp6g03260.1 | RTNLB2, BTI2 | ER-associated protein (Reticulon) | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g29195 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g24694 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc08g081730.4.1 | RTNLB2, BTI2,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g055250.3.1 | Solyc09g055250 | ER-associated protein (Reticulon) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25196 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016413_P001 | BTI1, RTNLB1,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023096_P002 | Zm00001e023096 | Reticulon-like protein B10 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e026095_P001 | RTNLB2, BTI2,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029083_P001 | BTI1, RTNLB1,... | ER-associated protein (Reticulon) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 61 | 214 |
| No external refs found! |