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  5. Sam_g52860

Sam_g52860


Description : chaperone *(Hsp90) & original description: none


Gene families : OG0000167 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52860

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene06228.t1 HSP81-3,... chaperone *(Hsp90) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0974.g094132 EMB1956,... not classified & original description: CDS=1-645 0.03 OrthoFinder output from all 47 species
Cba_g62434 HSP81-3,... chaperone *(Hsp90) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G049900.1 HSP81-3,... chaperone *(Hsp90) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.32G055000.1 AtHsp90.7,... chaperone *(Hsp90) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g27465 AtHsp90.7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22823 HSP81-1, HSP83,... chaperone *(Hsp90) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g04900.1 AtHsp90.7,... chaperone (Hsp90) 0.02 OrthoFinder output from all 47 species
Msp_g33888 Hsp81.4, AtHsp90.4 chaperone *(Hsp90) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16720 HSP81-3,... chaperone *(Hsp90) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g22958 EMB1956,... chaperone *(Hsp90) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
MF GO:0140662 ATP-dependent protein folding chaperone IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001404 Hsp90_fam 2 104
No external refs found!