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  5. Sam_g52548

Sam_g52548


Description : not classified & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52548
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Adi_g011334 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08844 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37879 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38472 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15593 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004668 protein-arginine deiminase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009445 putrescine metabolic process IEP HCCA
BP GO:0009446 putrescine biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 273 601
IPR008811 Glycosyl_hydrolases_36 1 252
No external refs found!