Sam_g52368


Description : not classified & original description: none


Gene families : OG0000977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52368
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Adi_g115816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene10116.t1 Aspi01Gene10116 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39976.t2 Aspi01Gene39976 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g12604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05113 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_38631 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g42410.1 LOC_Os07g42410 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g11498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429567g0010 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12627 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g11338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47576 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g48843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035552_P002 Zm00001e035552 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!