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  5. Lfl_g30568

Lfl_g30568


Description : component *(eS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30568
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
AT4G25740 No alias RNA binding Plectin/S10 domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G41520 No alias RNA binding Plectin/S10 domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G52650 No alias RNA binding Plectin/S10 domain-containing protein 0.05 OrthoFinder output from all 47 species
Adi_g025624 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Adi_g071847 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Adi_g075195 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Adi_g075196 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Als_g38500 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g50723 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g18378 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aop_g21327 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g31056 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g68055 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0034.g025251 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g24522 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cba_g29488 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.11G066500.1 Ceric.11G066500 component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.23G017600.1 Ceric.23G017600 component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001164.5 No alias 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
Dac_g24156 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dac_g26317 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g23653 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g50620 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dde_g06974 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01019409001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_10517 No alias component RPS10 of SSU proteome 0.05 OrthoFinder output from all 47 species
Gb_10518 No alias component RPS10 of SSU proteome 0.05 OrthoFinder output from all 47 species
LOC_Os01g73160.1 LOC_Os01g73160 component RPS10 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os02g34460.2 LOC_Os02g34460 component RPS10 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os04g35090.1 LOC_Os04g35090 component RPS10 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_111018g0010 No alias component RPS10 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_314020g0010 No alias component RPS10 of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp2g00580.1 No alias component RPS10 of SSU proteome 0.06 OrthoFinder output from all 47 species
Msp_g16642 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g06541 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c10_21170V3.1 Pp3c10_21170 RNA binding Plectin/S10 domain-containing protein 0.03 OrthoFinder output from all 47 species
Pp3c14_1810V3.1 Pp3c14_1810 RNA binding Plectin/S10 domain-containing protein 0.05 OrthoFinder output from all 47 species
Pp3c23_13100V3.1 Pp3c23_13100 RNA binding Plectin/S10 domain-containing protein 0.02 OrthoFinder output from all 47 species
Pp3c24_2340V3.1 Pp3c24_2340 RNA binding Plectin/S10 domain-containing protein 0.02 OrthoFinder output from all 47 species
Ppi_g07647 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12896 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g14221 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g30478 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g31720 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g42638 No alias lysine-rich arabinogalactan protein & original description: none 0.05 OrthoFinder output from all 47 species
Smo37555 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Solyc01g099670.3.1 Solyc01g099670 component RPS10 of SSU proteome 0.06 OrthoFinder output from all 47 species
Solyc12g096540.2.1 Solyc12g096540 component RPS10 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g13745 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g14505 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g43220 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g02351 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Tin_g35060 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e008107_P001 Zm00001e008107 component RPS10 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e028280_P001 Zm00001e028280 component RPS10 of SSU proteome 0.06 OrthoFinder output from all 47 species
Zm00001e040881_P001 Zm00001e040881 component RPS10 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0019008 molybdopterin synthase complex IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005326 S10_plectin_N 54 145
No external refs found!