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  5. Sam_g52062

Sam_g52062


Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52062

Target Alias Description ECC score Gene Family Method Actions
AT2G38360 PRA1.B4 prenylated RAB acceptor 1.B4 0.02 OrthoFinder output from all 47 species
AT5G05380 PRA1.B3 prenylated RAB acceptor 1.B3 0.02 OrthoFinder output from all 47 species
Als_g52368 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28433.t1 PRA1.B2, Aspi01Gene28433 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67192 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g53070.1 PRA1.E, LOC_Os03g53070 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Len_g04570 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13013 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05618 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24043 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023344 PRA1.B1 B-G-class Rab-GDF protein & original description: CDS=1-633 0.03 OrthoFinder output from all 47 species
Smo271785 PRA1.B2 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Solyc01g097230.4.1 PRA1.E, Solyc01g097230 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Spa_g40187 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 97 237
No external refs found!