Sam_g51505


Description : not classified & original description: none


Gene families : OG0003766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003766_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51505

Target Alias Description ECC score Gene Family Method Actions
Adi_g012337 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19660 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20569 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33854.t1 IQD5, Aspi01Gene33854 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0037.g025915 IQD6 not classified & original description: CDS=920-2581 0.03 OrthoFinder output from all 47 species
Ceric.10G000500.1 IQD5, Ceric.10G000500 not classified & original description: pacid=50612212... 0.04 OrthoFinder output from all 47 species
Ehy_g26920 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06638 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09997 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04521 IQD6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15162 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005727 IQD3 not classified & original description: CDS=1-1620 0.02 OrthoFinder output from all 47 species
Sam_g51506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10562 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR025064 DUF4005 457 517
IPR000048 IQ_motif_EF-hand-BS 125 144
No external refs found!