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  5. Sam_g51141

Sam_g51141


Description : small GTPase *(ROP) & original description: none


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00186910 ATRAC11, ARAC11,... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00095870 ARAC7, ROP9,... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.05 OrthoFinder output from all 47 species
AT4G28950 ARAC7, ROP9,... RHO-related protein from plants 9 0.02 OrthoFinder output from all 47 species
AT4G35020 ARAC3, RAC3,... RAC-like 3 0.02 OrthoFinder output from all 47 species
AT5G45970 ARAC2, RAC2,... RAC-like 2 0.03 OrthoFinder output from all 47 species
Adi_g003765 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23892 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25534 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01235 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06146 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18198 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22369 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35809.t1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024979 ATRAC1, ROP3,... not classified & original description: CDS=801-1349 0.03 OrthoFinder output from all 47 species
Cba_g14200 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14832 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27597 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G010600.1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.36G016200.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.38G025400.1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g03585 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g37057 ATRAC11, ARAC11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42232 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05325 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09488 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18052 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007804001 ATRAC10, ARAC10,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01015359001 ARAC7, ROP9,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01020653001 ATROP4, ROP4,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os01g12900.1 ARAC7, ROP9,... Rac-like GTP-binding protein 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os02g20850.1 ATRAC1, ROP3,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50860.1 ATRAC8, ATROP10,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g43820.1 ARAC7, ROP9,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12790.1 ATRAC8, ATROP10,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Len_g13885 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36377 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38022 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_948089g0010 ATRAC11, ARAC11,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Mp7g17540.1 ATRAC11, ARAC11,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Msp_g03491 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01865 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05700 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09513 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04924 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11648 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14285 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004935 ATROP4, ROP4,... small GTPase *(ROP) & original description: CDS=382-930 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010162 ATROP4, ROP4,... not classified & original description: CDS=1-690 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020708 ARAC3, RAC3,... small GTPase *(ROP) & original description: CDS=388-1065 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024188 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: CDS=374-982 0.05 OrthoFinder output from all 47 species
Sam_g04900 No alias small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07595 No alias small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g23832 No alias small GTPase *(ROP) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g27850 No alias small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g077400.4.1 ARAC2, RAC2,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
Solyc07g020800.3.1 ARAC7, ROP9,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Spa_g10601 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32766 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03089 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03146 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016302_P001 ATRAC1, ROP3,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Zm00001e023913_P001 ATRAC8, ATROP10,... small GTPase (ROP) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 207
No external refs found!