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  5. Sam_g51082

Sam_g51082


Description : regulatory protein *(DAZ) of male germ cell division & original description: none


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51082
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.03 OrthoFinder output from all 47 species
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g081280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02284 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
LOC_Os02g44130.1 LOC_Os02g44130 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g07410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_160930g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g077980.1.1 ZAT10, STZ,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g073075.1.1 Solyc11g073075 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g21129 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Zm00001e005777_P001 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e019350_P001 Zm00001e019350 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!