Description : component *(SCC3) of cohesin regulator complex & original description: none
Gene families : OG0004065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004065_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00057p00122610 | SCC3, ATSCC3,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | OrthoFinder output from all 47 species | |
AT2G47980 | SCC3, ATSCC3 | sister-chromatid cohesion protein 3 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g059337 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.05 | OrthoFinder output from all 47 species | |
Aob_g03603 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0315.g064312 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.18G084600.1 | SCC3, ATSCC3,... | component *(SCC3) of cohesin regulator complex &... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000189.50 | SCC3, ATSCC3 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g23606 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01011020001 | SCC3, ATSCC3 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os05g09620.1 | SCC3, ATSCC3,... | component SCC3 of cohesin regulator complex | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g34617 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
MA_10426289g0010 | SCC3, ATSCC3 | Sister-chromatid cohesion protein 3 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_10428096g0010 | SCC3, ATSCC3 | Sister-chromatid cohesion protein 3 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_77394g0010 | SCC3, ATSCC3 | component SCC3 of cohesin regulator complex | 0.03 | OrthoFinder output from all 47 species | |
Mp3g01380.1 | SCC3, ATSCC3 | component SCC3 of cohesin regulator complex | 0.02 | OrthoFinder output from all 47 species | |
Msp_g14889 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g08679 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g15148 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g10942 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0065.g015994 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g026510.4.1 | SCC3, ATSCC3,... | component SCC3 of cohesin regulator complex | 0.05 | OrthoFinder output from all 47 species | |
Spa_g04594 | SCC3, ATSCC3 | component *(SCC3) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011344_P004 | SCC3, ATSCC3,... | component SCC3 of cohesin regulator complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000278 | mitotic cell cycle | IEP | HCCA |
CC | GO:0000775 | chromosome, centromeric region | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
BP | GO:0007049 | cell cycle | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0098687 | chromosomal region | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013721 | STAG | 195 | 303 |
No external refs found! |