Sam_g50253

Description : not classified & original description: none

Gene families : OG0001054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001054_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g50253
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
Aop_g34288	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g43689	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g55203	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g06886	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g12847	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g37200	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g20241	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g31967	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g40517	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g31256	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g08608	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g17559	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17586	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g19855	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g25792	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g27013	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29081	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29205	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g29449	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g30500	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Sam_g42969	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g49413	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50072	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52214	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0008061	chitin binding	IEP	HCCA
MF	GO:0008810	cellulase activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009251	glucan catabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030245	cellulose catabolic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051275	beta-glucan catabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001254	Trypsin_dom	44	283

External Links

No external refs found!

Sam_g50253

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation