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  5. Sam_g50232

Sam_g50232


Description : not classified & original description: none


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50232
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Aop_g13636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69297.t1 LNG1, Aspi01Gene69297 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G047000.1 Ceric.13G047000 not classified & original description: pacid=50636886... 0.02 OrthoFinder output from all 47 species
Mp1g18360.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g20124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR022212 DUF3741 264 302
IPR025486 DUF4378 866 1036
No external refs found!