Sam_g48692

Description : signal peptidase *(SPP) & original description: none

Gene families : OG0003455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003455_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g48692

Target	Alias	Description	ECC score	Gene Family Method
Als_g31800	ATSPP, SPP	signal peptidase *(SPP) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012454	ATSPP, SPP	signal peptidase *(SPP) & original description: CDS=140-1189	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012456	ATSPP, SPP	signal peptidase *(SPP) & original description: CDS=28-1056	0.02	OrthoFinder output from all 47 species
Solyc01g008820.3.1	ATSPP, SPP,...	signal peptidase (SPP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004190	aspartic-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0070001	aspartic-type peptidase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007369	Peptidase_A22B_SPP	51	321

External Links

No external refs found!