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  5. Sam_g47227

Sam_g47227


Description : not classified & original description: none


Gene families : OG0002172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47227

Target Alias Description ECC score Gene Family Method Actions
Als_g04042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025627 No alias not classified & original description: CDS=66-695 0.04 OrthoFinder output from all 47 species
Cba_g10869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g55270.1 LOC_Os01g55270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g01215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g016670.3.1 Solyc08g016670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g14940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019769_P001 Zm00001e019769 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007052 CS_dom 65 141
IPR015120 Siah-Interact_N 4 45
No external refs found!