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  5. Sam_g46618

Sam_g46618


Description : component *(LSm1) of U6-associated LSm accessory ribonucleoprotein complex & original description: none


Gene families : OG0003066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46618

Target Alias Description ECC score Gene Family Method Actions
AT1G19120 No alias Small nuclear ribonucleoprotein family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014080 No alias component *(LSm1) of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Azfi_s2433.g111360 No alias component *(LSm1) of U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 11 77
No external refs found!