Sam_g45086


Description : not classified & original description: none


Gene families : OG0034057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0034057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g45086
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Sam_g24484 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR003134 Hs1_Cortactin 94 129
IPR003134 Hs1_Cortactin 131 166
IPR003134 Hs1_Cortactin 279 314
IPR003134 Hs1_Cortactin 316 337
IPR003134 Hs1_Cortactin 242 277
IPR003134 Hs1_Cortactin 205 239
IPR003134 Hs1_Cortactin 168 203
No external refs found!