Sam_g42941


Description : component *(eL15) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g42941

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00023340 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT4G16720 No alias Ribosomal protein L23/L15e family protein 0.05 OrthoFinder output from all 47 species
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.07 OrthoFinder output from all 47 species
Adi_g011907 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g00218 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene36533.t1 Aspi01Gene36533 component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0148.g053106 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cba_g11183 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.30G015200.1 Ceric.30G015200 component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.31G036200.1 Ceric.31G036200 component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g12320 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g06645 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g28550 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g36045 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g05378 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Gb_36986 No alias component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g40180.1 LOC_Os03g40180 component RPL15 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os05g19370.1 LOC_Os05g19370 component RPL15 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Lfl_g00902 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_29804g0010 No alias component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Nbi_g01701 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g30101 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c17_22180V3.1 Pp3c17_22180 Ribosomal protein L23/L15e family protein 0.03 OrthoFinder output from all 47 species
Ppi_g26533 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g43751 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016249 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g24927 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Sam_g36073 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g36074 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo270259 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc04g008460.4.1 Solyc04g008460 component RPL15 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Solyc06g060400.3.1 Solyc06g060400 component RPL15 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Solyc06g064630.3.1 Solyc06g064630 component RPL15 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g39098 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g30457 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e010380_P001 Zm00001e010380 component RPL15 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e032897_P001 Zm00001e032897 component RPL15 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e034995_P001 Zm00001e034995 component RPL15 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e034996_P001 Zm00001e034996 component RPL15 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030431 sleep IEP HCCA
BP GO:0032222 regulation of synaptic transmission, cholinergic IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032411 positive regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032414 positive regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034764 positive regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0034767 positive regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0043266 regulation of potassium ion transport IEP HCCA
BP GO:0043268 positive regulation of potassium ion transport IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043270 positive regulation of monoatomic ion transport IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050804 modulation of chemical synaptic transmission IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051050 positive regulation of transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:0099177 regulation of trans-synaptic signaling IEP HCCA
BP GO:1901016 regulation of potassium ion transmembrane transporter activity IEP HCCA
BP GO:1901018 positive regulation of potassium ion transmembrane transporter activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901379 regulation of potassium ion transmembrane transport IEP HCCA
BP GO:1901381 positive regulation of potassium ion transmembrane transport IEP HCCA
BP GO:1903818 positive regulation of voltage-gated potassium channel activity IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
BP GO:1904064 positive regulation of cation transmembrane transport IEP HCCA
BP GO:2001257 regulation of cation channel activity IEP HCCA
BP GO:2001259 positive regulation of cation channel activity IEP HCCA
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!