Sam_g42941

Description : component *(eL15) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0002002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g42941

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00023340	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AT4G16720	No alias	Ribosomal protein L23/L15e family protein	0.05	OrthoFinder output from all 47 species
AT4G17390	No alias	Ribosomal protein L23/L15e family protein	0.07	OrthoFinder output from all 47 species
Adi_g011907	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g00218	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aspi01Gene36533.t1	Aspi01Gene36533	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Azfi_s0148.g053106	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cba_g11183	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ceric.30G015200.1	Ceric.30G015200	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.31G036200.1	Ceric.31G036200	component *(eL15) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000310.75	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g12320	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dcu_g06645	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g28550	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g36045	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ehy_g05378	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01007404001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
GSVIVT01018183001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Gb_36986	No alias	component RPL15 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os03g40180.1	LOC_Os03g40180	component RPL15 of LSU proteome component	0.05	OrthoFinder output from all 47 species
LOC_Os05g19370.1	LOC_Os05g19370	component RPL15 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Lfl_g00902	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_29804g0010	No alias	component RPL15 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp1g06500.1	No alias	component RPL15 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Nbi_g01701	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g30101	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c17_22180V3.1	Pp3c17_22180	Ribosomal protein L23/L15e family protein	0.03	OrthoFinder output from all 47 species
Ppi_g26533	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g43751	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016249	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g24927	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Sam_g36073	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sam_g36074	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Smo270259	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Solyc04g008460.4.1	Solyc04g008460	component RPL15 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Solyc06g060400.3.1	Solyc06g060400	component RPL15 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Solyc06g064630.3.1	Solyc06g064630	component RPL15 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Spa_g39098	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Tin_g30457	No alias	component *(eL15) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e010380_P001	Zm00001e010380	component RPL15 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Zm00001e032897_P001	Zm00001e032897	component RPL15 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Zm00001e034995_P001	Zm00001e034995	component RPL15 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Zm00001e034996_P001	Zm00001e034996	component RPL15 of LSU proteome component	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
BP	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010959	regulation of metal ion transport	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0030431	sleep	IEP	HCCA
BP	GO:0032222	regulation of synaptic transmission, cholinergic	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032411	positive regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032414	positive regulation of ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034764	positive regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034767	positive regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0043266	regulation of potassium ion transport	IEP	HCCA
BP	GO:0043268	positive regulation of potassium ion transport	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0043270	positive regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0050804	modulation of chemical synaptic transmission	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051050	positive regulation of transport	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
BP	GO:0099177	regulation of trans-synaptic signaling	IEP	HCCA
BP	GO:1901016	regulation of potassium ion transmembrane transporter activity	IEP	HCCA
BP	GO:1901018	positive regulation of potassium ion transmembrane transporter activity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901379	regulation of potassium ion transmembrane transport	IEP	HCCA
BP	GO:1901381	positive regulation of potassium ion transmembrane transport	IEP	HCCA
BP	GO:1903818	positive regulation of voltage-gated potassium channel activity	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:1904064	positive regulation of cation transmembrane transport	IEP	HCCA
BP	GO:2001257	regulation of cation channel activity	IEP	HCCA
BP	GO:2001259	positive regulation of cation channel activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000439	Ribosomal_L15e	2	190

External Links

No external refs found!

Sam_g42941

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation