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  5. Sam_g41848

Sam_g41848


Description : not classified & original description: none


Gene families : OG0000028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g41848
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT2G44460 BGLU28 beta glucosidase 28 0.02 OrthoFinder output from all 47 species
AT3G09260 PSR3.1, BGLU23,... Glycosyl hydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g13007 BGLU42 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g53179 BGLU42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012650001 BGLU46 Cell wall.lignin.monolignol glycosylation and... 0.02 OrthoFinder output from all 47 species
MA_10427205g0010 BGLU32 Beta-glucosidase 13 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Pir_g29326 BGLU11 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30279 BGLU43 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034671_P001 BGLU11, Zm00001e034671 Beta-glucosidase 31 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 59 97
No external refs found!