Sam_g40268


Description : not classified & original description: none


Gene families : OG0004295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004295_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g40268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00015380 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G33530 No alias Transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Ceric.03G091500.1 Ceric.03G091500 not classified & original description: pacid=50572953... 0.03 OrthoFinder output from all 47 species
Dcu_g04143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g04440.2 LOC_Os02g04440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g18320.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g33633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!