Sam_g39712

Description : class II ARF-GAP ARF-GTPase-activating protein & original description: none

Gene families : OG0002023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002023_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g39712

Target	Alias	Description	ECC score	Gene Family Method
Ala_g21850	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
Als_g02492	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
Ceric.11G029600.1	NEV, AGD5,...	class II ARF-GAP ARF-GTPase-activating protein &...	0.06	OrthoFinder output from all 47 species
Ceric.22G008500.1	NEV, AGD5,...	class II ARF-GAP ARF-GTPase-activating protein &...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021612.40	NEV, AGD5	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 47 species
Dde_g09319	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
Gb_05495	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein	0.02	OrthoFinder output from all 47 species
LOC_Os07g37650.1	NEV, AGD5, LOC_Os07g37650	class II ARF-GAP ARF-GTPase-activating protein	0.03	OrthoFinder output from all 47 species
Lfl_g06606	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
MA_10431320g0010	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein	0.05	OrthoFinder output from all 47 species
MA_10436648g0010	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein	0.03	OrthoFinder output from all 47 species
Mp4g17550.1	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein	0.02	OrthoFinder output from all 47 species
Msp_g06105	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012144	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
Solyc03g098500.4.1	AGD15, Solyc03g098500	class II ARF-GAP ARF-GTPase-activating protein	0.02	OrthoFinder output from all 47 species
Spa_g12451	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
Spa_g56851	NEV, AGD5	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Zm00001e010559_P002	NEV, AGD5, Zm00001e010559	class II ARF-GAP ARF-GTPase-activating protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005096	GTPase activator activity	IEA	Interproscan
MF	GO:0008047	enzyme activator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
CC	GO:0031011	Ino80 complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
CC	GO:0097346	INO80-type complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001164	ArfGAP_dom	19	132

External Links

No external refs found!

Sam_g39712

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation