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  5. Sam_g39254

Sam_g39254


Description : not classified & original description: none


Gene families : OG0000586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000586_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g39254

Target Alias Description ECC score Gene Family Method Actions
AT1G27440 ATGUT1, IRX10, GUT2 Exostosin family protein 0.02 OrthoFinder output from all 47 species
AT5G61840 GUT1 Exostosin family protein 0.02 OrthoFinder output from all 47 species
Adi_g082301 FRA8, IRX7 glucuronoxylan glucuronosyltransferase *(IRX7) &... 0.02 OrthoFinder output from all 47 species
Als_g16082 GUT1 xylosyltransferase *(IRX10) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16545 FRA8, IRX7 glucuronoxylan glucuronosyltransferase *(IRX7) &... 0.03 OrthoFinder output from all 47 species
Ceric.31G007300.1 F8H, Ceric.31G007300 glucuronoxylan glucuronosyltransferase *(IRX7) &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g70190.1 ATGUT1, IRX10,... xylosyltransferase (IRX10) 0.03 OrthoFinder output from all 47 species
Len_g36214 ATGUT1, IRX10, GUT2 xylosyltransferase *(IRX10) & original description: none 0.04 OrthoFinder output from all 47 species
MA_18829g0010 GUT1 xylosyltransferase (IRX10) 0.02 OrthoFinder output from all 47 species
Ore_g42417 F8H glucuronoxylan glucuronosyltransferase *(IRX7) &... 0.02 OrthoFinder output from all 47 species
Pir_g07986 GUT1 xylosyltransferase *(IRX10) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19992 GUT1 xylosyltransferase *(IRX10) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09728 GUT1 xylosyltransferase *(IRX10) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000912 ATGUT1, IRX10, GUT2 xylosyltransferase *(IRX10) & original description: CDS=519-1778 0.03 OrthoFinder output from all 47 species
Sam_g11887 No alias glucuronoxylan glucuronosyltransferase *(IRX7) &... 0.03 OrthoFinder output from all 47 species
Sam_g49445 No alias glucuronoxylan glucuronosyltransferase *(IRX7) &... 0.04 OrthoFinder output from all 47 species
Smo442111 GUT1 Cell... 0.03 OrthoFinder output from all 47 species
Smo442723 F8H Cell... 0.02 OrthoFinder output from all 47 species
Solyc06g068770.3.1 GUT1, Solyc06g068770 xylosyltransferase (IRX10) 0.03 OrthoFinder output from all 47 species
Spa_g05392 ATGUT1, IRX10, GUT2 xylosyltransferase *(IRX10) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06232 GUT1 xylosyltransferase *(IRX10) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29853 ATGUT1, IRX10, GUT2 xylosyltransferase *(IRX10) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018772_P001 ATGUT1, IRX10,... xylosyltransferase (IRX10) 0.03 OrthoFinder output from all 47 species
Zm00001e028403_P001 ATGUT1, IRX10,... xylosyltransferase (IRX10) 0.03 OrthoFinder output from all 47 species
Zm00001e032322_P001 GUT1, Zm00001e032322 xylosyltransferase (IRX10) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 204 389
IPR040911 Exostosin_GT47 9 192
No external refs found!