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Description : EC_5.1 racemase or epimerase & original description: none
Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g38451 | |
| Cluster | HCCA: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00132940 | UGE5,... | Carbohydrate metabolism.nucleotide sugar... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G12780 | ATUGE1, UGE1 | UDP-D-glucose/UDP-D-galactose 4-epimerase 1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g025471 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g01852 | UGE2, ATUGE2 | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g37527 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g06642 | MUR4, UXE1, HSR8 | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G016400.1 | UGE2, ATUGE2,... | EC_5.1 racemase or epimerase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08341 | No alias | EC_5.1 racemase or epimerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g51670.1 | UGE2, ATUGE2,... | UDP-D-glucose 4-epimerase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g04690.1 | MUR4, UXE1,... | UDP-D-xylose 4-epimerase | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04833 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02051 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03384 | UGE2, ATUGE2 | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c5_25130V3.1 | REB1, UGE4,... | NAD(P)-binding Rossmann-fold superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g001039 | UGE5 | EC_5.1 racemase or epimerase & original description: CDS=1-1365 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0867.g027810 | UGE2, ATUGE2 | not classified & original description: CDS=124-1029 | 0.02 | OrthoFinder output from all 47 species | |
| Smo438368 | UGE5 | Carbohydrate metabolism.nucleotide sugar... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g080570.4.1 | ATUGE1, UGE1,... | UDP-D-glucose 4-epimerase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001385_P002 | MUR4, UXE1,... | UDP-D-xylose 4-epimerase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001664_P001 | UGE2, ATUGE2,... | UDP-D-glucose 4-epimerase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0019107 | myristoyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016040 | NAD(P)-bd_dom | 8 | 215 |
| No external refs found! |