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  5. Sam_g38202

Sam_g38202


Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g38202
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266250 TBL20,... Protein trichome birefringence-like 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00121970 TBL37,... Protein trichome birefringence-like 37 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00162030 TBR Protein trichome birefringence OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00085p00172090 TBL2,... Protein trichome birefringence-like 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G70230 TBL27 TRICHOME BIREFRINGENCE-LIKE 27 0.02 OrthoFinder output from all 47 species
AT4G01080 TBL26 TRICHOME BIREFRINGENCE-LIKE 26 0.02 OrthoFinder output from all 47 species
Adi_g078636 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084057 TBL24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64230.t1 TBL14, Aspi01Gene64230 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1381.g102473 TBL11 not classified & original description: CDS=436-1812 0.04 OrthoFinder output from all 47 species
Ceric.11G027400.1 TBL12, Ceric.11G027400 not classified & original description: pacid=50596610... 0.02 OrthoFinder output from all 47 species
Ceric.18G036000.1 TBL25, Ceric.18G036000 not classified & original description: pacid=50621286... 0.02 OrthoFinder output from all 47 species
Ceric.31G004600.1 TBL23, Ceric.31G004600 mannan O-acetyltransferase *(MOAT) & original... 0.02 OrthoFinder output from all 47 species
Dac_g20904 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01764 TBL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09995 TBR Protein trichome birefringence OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os01g11810.1 TBL38, LOC_Os01g11810 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os06g16150.1 TBL19, LOC_Os06g16150 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g11124 TBL25 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10143614g0010 TBL11 Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g37893 TBL13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47835 TBL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11644 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33272 TBL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001841 TBL5 not classified & original description: CDS=1-1830 0.04 OrthoFinder output from all 47 species
Sam_g18097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g076400.2.1 TBL34, Solyc10g076400 xylan O-acetyltransferase (XOAT) 0.01 OrthoFinder output from all 47 species
Zm00001e004741_P002 TBL19, Zm00001e004741 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e017519_P001 TBL38, Zm00001e017519 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e019393_P001 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!