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  5. Sam_g37972

Sam_g37972


Description : plastidic signal peptidase *(PLSP/TPP) & original description: none


Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37972
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT2G30440 TPP thylakoid processing peptide 0.02 OrthoFinder output from all 47 species
Adi_g017024 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G036100.1 PLSP1, Ceric.34G036100 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g13435 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g20568 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Gb_22231 PLSP1 plastidic signal peptidase (PLSP/TPP) 0.03 OrthoFinder output from all 47 species
Lfl_g20986 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g21310 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Msp_g09723 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16230 No alias plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Tin_g30631 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Tin_g32739 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e034327_P001 Zm00001e034327 plastidic signal peptidase (PLSP/TPP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006465 signal peptide processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019533 Peptidase_S26 269 416
No external refs found!