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  5. Sam_g37939

Sam_g37939


Description : not classified & original description: none


Gene families : OG0003621 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37939
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT1G04430 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 OrthoFinder output from all 47 species
AT3G23300 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.04 OrthoFinder output from all 47 species
AT4G14360 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
AT5G14430 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Aev_g04124 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g61692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0934.g093097 No alias not classified & original description: CDS=1-1923 0.02 OrthoFinder output from all 47 species
Ceric.03G077500.1 Ceric.03G077500 not classified & original description: pacid=50571534... 0.03 OrthoFinder output from all 47 species
Ceric.30G017700.1 Ceric.30G017700 not classified & original description: pacid=50608226... 0.03 OrthoFinder output from all 47 species
Dcu_g09996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027829001 No alias Probable methyltransferase PMT3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_17864 No alias Probable methyltransferase PMT3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26012 No alias Probable methyltransferase PMT3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os10g33720.1 LOC_Os10g33720 Probable methyltransferase PMT1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Lfl_g04094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp6g01780.1 No alias Probable methyltransferase PMT1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g09078 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016615 No alias not classified & original description: CDS=40-2106 0.04 OrthoFinder output from all 47 species
Smo93209 No alias Probable methyltransferase PMT3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc03g005600.3.1 Solyc03g005600 Probable methyltransferase PMT8 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g13051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004577_P001 Zm00001e004577 Probable methyltransferase PMT8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012692_P001 Zm00001e012692 Probable methyltransferase PMT8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 195 704
No external refs found!