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  5. Sam_g35799

Sam_g35799


Description : cytokinin signal transducer *(AHP) & original description: none


Gene families : OG0001008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35799
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT5G39340 AHP3, ATHP2 histidine-containing phosphotransmitter 3 0.02 OrthoFinder output from all 47 species
Aev_g26063 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g00447 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55759.t1 AHP1, Aspi01Gene55759 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_130008g0010 AHP5 AHP-type cytokinin signal transducer 0.02 OrthoFinder output from all 47 species
Pir_g64946 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_11720V3.1 AHP5, Pp3c17_11720 histidine-containing phosphotransfer factor 5 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019119 AHP1 cytokinin signal transducer *(AHP) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g116720.3.1 HP6, AHP6, Solyc03g116720 AHP-type cytokinin signal transducer 0.03 OrthoFinder output from all 47 species
Spa_g01446 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23422 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00353 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022070_P002 AHP1, Zm00001e022070 AHP-type cytokinin signal transducer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008207 Sig_transdc_His_kin_Hpt_dom 35 115
No external refs found!