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  5. Sam_g33211

Sam_g33211


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g33211
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cba_g02979 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07309 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13552 CAM3, acam-3 Calmodulin OS=Solanum lycopersicum (sp|p27161|calm_sollc : 290.0) 0.03 OrthoFinder output from all 47 species
Gb_20553 ACAM-2, CAM5 Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g41210.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
Lfl_g14471 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10646 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g35231 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05980 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63264 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03542 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004511 CAM3, acam-3 calcium sensor *(CML) & original description: CDS=2-589 0.02 OrthoFinder output from all 47 species
Solyc03g005240.2.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
Spa_g02829 TCH1, CAM1, ACAM-1 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001501_P001 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
Zm00001e038302_P001 ACAM-4, CAM4,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 123 186
IPR002048 EF_hand_dom 52 113
No external refs found!